Get Organism to Nucleotide Sequence Associations

https://w3id.org/np/RA5ftKN-kmUkkclAhBSD8SFFXjC_NWiNy4NiP-O79Ncpc

run this query

 Get Organism to Nucleotide Sequence Associations grlc-query ▼ comment... approve/disapprove... edit as derived nanopublication... create new with same template...

This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/kpxl/grlc/grlc-query grlc query .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

http://www.w3.org/2000/01/rdf-schema#label has the name (this is a literal)

"Get Organism to Nucleotide Sequence Associations"

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

http://purl.org/dc/terms/description has the description (this is a literal)

"This query returns all organism-to-nucleotide-sequence associations."

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

https://w3id.org/kpxl/grlc/endpoint has the endpoint https://w3id.org/np/l/nanopub-...db39ba097848e5b41bf3fec7d66e44

dc3636ccda207965f3ac58e3a54c80d1a9db39ba097848e5b41bf3fec7d66e44

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

http://purl.org/dc/terms/license has the usage license http://www.apache.org/licenses/LICENSE-2.0

LICENSE-2.0

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

https://w3id.org/kpxl/grlc/sparql has the query (this is a literal)

"prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> select ?organism ?relation ?nucleotidesequence ?creator ?date ?np where { graph npa:graph { ?np npx:hasNanopubType biodiv:OrganismToNucleotideSequenceAssociation . ?np npa:hasValidSignatureForPublicKeyHash ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pubkey . } ?np dct:created ?date . ?np np:hasAssertion ?a . ?np npx:introduces ?association . optional { ?np npx:signedBy ?creator . } } graph ?a { ?association a biodiv:OrganismToNucleotideSequenceAssociation . ?association biolink:predicate ?relation . ?association biolink:subject ?organism . ?association biolink:object ?nucleotidesequence . } } order by desc(?date)"

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This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RA5ftKN-km.../assertion The assertion above http://www.w3.org/ns/prov#wasAttributedTo is attributed to https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication http://purl.org/dc/terms/creator is created by https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication http://purl.org/dc/terms/license is published under the license https://creativecommons.org/licenses/by/4.0/

Attribution 4.0 International (CC BY 4.0)

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https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

http://xmlns.com/foaf/0.1/name has the name (this is a literal)

"Tobias Kuhn"

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal)

"2025-12-15T08:44:52.787Z"

(xsd:dateTime) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication links to the assertion template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate was created from the assertion template https://w3id.org/np/RAEFAt-QcF...

RAEFAt-QcF

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication links to the provenance template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate was created from the provenance template https://w3id.org/np/RA7lSq6MuK...

RA7lSq6MuK

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template https://w3id.org/np/RA0J4vUn_d...

RA0J4vUn_d

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template https://w3id.org/np/RAukAcWHRD...

RAukAcWHRD

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../sig

sig

http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... this nanopublication .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../sig

sig

http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal)

"RSA"

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../sig

sig

http://purl.org/nanopub/x/hasPublicKey has the public key (this is a literal)

"MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB"

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../sig

sig

http://purl.org/nanopub/x/hasSignature has the signature (this is a literal)

"0HY8CUqI9EWTKXIeQ6+gY/j6PT8vqRBGpvLrjVx+7T/Nmdn+OzbCYvAaGcFjLcDQdPPwhaGEMuT9MOrKkT8YnvlylhB4I8Ps92QmNoPKc6biTOZtej1rgV74K3RvE1/KzqGBbLC61z6x6T3ZXAwClHrk8izLL1H1vvLH4FvH0ME="

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This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../sig

sig

http://purl.org/nanopub/x/signedBy is signed by https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km... This nanopublication http://purl.org/nanopub/x/wasCreatedAt was created at https://nanodash.knowledgepixels.com/

nanodash.knowledgepixels.com

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This is the identifier for this whole nanopublication. https://w3id.org/np/RA5ftKN-km...

this nanopublication

http://purl.org/nanopub/x/embeds

embeds

This is a local identifier minted within the nanopublication. https://w3id.org/np/RA5ftKN-km.../get-org-to-ns-associations

get-org-to-ns-associations

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Tobias Kuhn, 15 Dec 2025, 08:44:52 UTC

References