Template: Expressing an association between an organism taxon and a chemical

https://w3id.org/np/RAYPTZVeBhqbabhNwh9aB0AoK_bz_Uk5Z3bEh-8gs0QiU

use this template...

 Template: Expressing an association between an organism taxon and a chemical AssertionTemplate UnlistedTemplate ▼ comment... approve/disapprove... edit as derived nanopublication... create new with same template... use template...

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/AssertionTemplate assertion template .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"Expressing an association between an organism taxon and a chemical"

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion http://purl.org/dc/terms/description has the description (this is a literal)

"Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a chemical."

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasTag has tag (this is a literal)

"Biodiversity"

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/UnlistedTemplate

Unlisted template

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasTargetNanopubType has the target nanopub type https://w3id.org/kpxl/biodiv/terms/BiodivNanopub

BiodivNanopub

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion assigns a pattern used to generate a human-readable label for the whole nanopublication https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern has the nanopub label pattern (this is a literal)

"${taxon} ${relation} ${chemical}"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st0

st0

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st0

st0

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/1999/02/22-rdf-syntax-ns#type

is a

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st0

st0

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object https://w3ihttps://w3id.org/kp...nismTaxonToChemicalAssociation

OrganismTaxonToChemicalAssociation

.

---

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st1

st1

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st1

st1

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/subject

subject

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st1

st1

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#taxon

taxon

.

---

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st2

st2

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st2

st2

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/predicate

predicate

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st2

st2

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#relation

relation

.

---

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st3

st3

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st3

st3

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/object

object

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st3

st3

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#chemical

chemical

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st0

st0

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st1

st1

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st2

st2

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#st3

st3

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/IntroducedResource

Introduced resource

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LocalResource

Local resource

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#chemical

chemical

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder

Guided choice placeholder

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#relation

relation

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder

Guided choice placeholder

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#taxon

taxon

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder

Guided choice placeholder

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#relation

relation

https://w3id.org/np/o/ntemplate/possibleValue has as possible value http://purl.obolibrary.org/obo/RO_0001019

RO_0001019

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#chemical

chemical

https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal)

"https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search="

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#relation

relation

https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal)

"https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q="

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#taxon

taxon

https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal)

"https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search="

.

http://purl.obolibrary.org/obo/RO_0001019

RO_0001019

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"contains"

.

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

is a

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"is an"

.

https://w3id.org/biolink/vocab/object

object

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"refers to the chemical"

.

https://w3id.org/biolink/vocab/predicate

predicate

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"refers to the relation (between taxon and chemical)"

.

https://w3id.org/biolink/vocab/subject

subject

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"refers to the organism taxon"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#association

association

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"this association"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#chemical

chemical

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the chemical to be associated with the taxon"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#relation

relation

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the type of relation between the taxon and the gene"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#taxon

taxon

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the organism taxon, e.g. a species"

.

https://w3ihttps://w3id.org/kp...nismTaxonToChemicalAssociation

OrganismTaxonToChemicalAssociation

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"organism taxon to chemical association"

.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RAYPTZVeBh...#assertion The assertion above http://www.w3.org/ns/prov#wasAttributedTo is attributed to https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication http://purl.org/dc/terms/creator is created by https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication http://purl.org/dc/terms/license is published under the license https://creativecommons.org/licenses/by/4.0/

Attribution 4.0 International (CC BY 4.0)

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication http://www.w3.org/ns/prov#wasDerivedFrom was derived from https://w3id.org/np/RAxvh4t8yo...

RAxvh4t8yo

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication http://www.w3.org/2000/01/rdf-schema#label has the label (this is a literal)

"Template: Expressing an association between an organism taxon and a chemical"

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal)

"2024-02-06T16:10:45.815Z"

(xsd:dateTime) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the assertion template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate was created from the assertion template http://purl.org/np/RAJwu5sVub...

RAJwu5sVub

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the provenance template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate was created from the provenance template http://purl.org/np/RANwQa4ICW...

RANwQa4ICW

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RA2vCBXZf-...

RA2vCBXZf-

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RAA2MfqdBC...

RAA2MfqdBC

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RABngHbKpo...

RABngHbKpo

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template http://purl.org/np/RAh1gm83Ji...

RAh1gm83Ji

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#sig

sig

http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... this nanopublication .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#sig

sig

http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal)

"RSA"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#sig

sig

http://purl.org/nanopub/x/hasPublicKey has the public key (this is a literal)

"MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB"

.

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAYPTZVeBh...#sig

sig

http://purl.org/nanopub/x/hasSignature has the signature (this is a literal)

"M1sBS+gFjvHJS1NoIsGIBb0ucaOiJMK+DrxkUoiH9nXsoemtcGVZ8Qf/mYYj3pqLOU69lRW9frUqS3s/Db4DMRX3/mjQsPg6dhY/KK5/aQWddjl0b8t8hp7tqv9aXBviHq+557u1kXDYd/YuQcAuOW+Cj1hGobM9Ir3YDEuEF7g="

.

This is the identifier for this whole nanopublication. https://w3id.org/np/RAYPTZVeBh... This nanopublication http://purl.org/dc/terms/creator

creator

https://orcid.org/0000-0003-3389-2191

Pierre-Marie Allard

.

Tobias Kuhn, 6 Feb 2024, 16:10:45 UTC

References